EDGAR: a software framework for the comparative analysis of prokaryotic genomes
Blom, Jochen ; Albaum, Stefan ; Doppmeier, Daniel ; Pühler, Alfred ; Vorhölter, Frank-Jörg ; Zakrzewski, Martha ; Goesmann, AlexanderIn: BMC Bioinformatics, Jg. 10 H. 1Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence [...]
Eikmeyer, Felix Gregor ; Rademacher, Antje ; Hanreich, Angelika ; Hennig, Magdalena ; Jaenicke, Sebastian ; Maus, Irena ; Wibberg, Daniel ; Zakrzewski, Martha ; Pühler, Alfred ; Klocke, Michael ; Schlüter, AndreasIn: Biotechnology for Biofuels, Jg. 6 H. 1Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
Koeck, Daniela E. ; Maus, Irena ; Wibberg, Daniel ; Winkler, Anika ; Zverlov, Vladimir V. ; Liebl, Wolfgang ; Pühler, Alfred ; Schwarz, Wolfgang H. ; Schlüter, AndreasIn: Genome Announcements, Jg. 4 H. 4, S. e00687-16Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor
Koeck, Daniela E. ; Maus, Irena ; Wibberg, Daniel ; Winkler, Anika ; Zverlov, Vladimir V. ; Liebl, Wolfgang ; Pühler, Alfred ; Schwarz, Wolfgang H. ; Schlüter, AndreasIn: Genome Announcements, Jg. 4 H. 3, S. e00609-16Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes
Maus, Irena ; Bremges, Andreas ; Stolze, Yvonne ; Hahnke, Sarah ; Cibis, Katharina G. ; Koeck, Daniela E. ; Kim, Yong S. ; Kreubel, Jana ; Hassa, Julia ; Wibberg, Daniel ; Weimann, Aaron ; Off, Sandra ; Stantscheff, Robbin ; Zverlov, Vladimir V. ; Schwarz, Wolfgang H. ; König, Helmut ; Liebl, Wolfgang ; Scherer, Paul ; McHardy, Alice C. ; Sczyrba, Alexander [...]In: Biotechnology for Biofuels, Jg. 10 H. 1The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses
Maus, Irena ; Tubbesing, Tom Jonas ; Wibberg, Daniel ; Heyer, Robert ; Hassa, Julia ; Tomazetto, Geizecler ; Huang, Liren ; Bunk, Boyke ; Spröer, Cathrin ; Benndorf, Dirk ; Zverlov, Vladimir ; Pühler, Alfred ; Klocke, Michael ; Sczyrba, Alexander ; Schlüter, AndreasIn: Microorganisms, Jg. 8 H. 12Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditi [...]
Stolze, Yvonne ; Zakrzewski, Martha ; Maus, Irena ; Eikmeyer, Felix Gregor ; Jaenicke, Sebastian ; Rottmann, Nils ; Siebner, Clemens ; Pühler, Alfred ; Schlüter, AndreasIn: Biotechnology for Biofuels, Jg. 8 H. 1The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)
Verwaaijen, Bart ; Wibberg, Daniel ; Kröber, Magdalena ; Winkler, Anika ; Zrenner, Rita ; Bednarz, Hanna ; Niehaus, Karsten ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: PLOS ONE, Jg. 12 H. 5A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani
Verwaaijen, Bart ; Wibberg, Daniel ; Winkler, Anika ; Zrenner, Rita ; Bednarz, Hanna ; Niehaus, Karsten ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Scientific Reports, Jg. 9 H. 1Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14
Wibberg, Daniel ; Genzel, Franziska ; Verwaaijen, Bart ; Blom, Jochen ; Rupp, Oliver ; Goesmann, Alexander ; Zrenner, Rita ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Journal of Fungi, Jg. 7 H. 10The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf, Timo ; Droste, Julian ; Gren, Tetiana ; Ortseifen, Vera ; Schneiker-Bekel, Susanne ; Zemke, Till ; Pühler, Alfred ; Kalinowski, JörnIn: BMC Genomics, Jg. 18 H. 1