Hochschulschriften der UB Bielefeld / Naturwissenschaften und Mathematik / Filter Pühler, Alfred [1-20]

Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa
Castellani, Lucas G. ; Luchetti, Abril ; Nilsson, Juliet F. ; Pérez-Giménez, Julieta ; Wegener, Caren ; Schlüter, Andreas ; Pühler, Alfred ; Lagares, Antonio ; Brom, Susana ; Pistorio, Mariano ; Niehaus, Karsten ; Torres Tejerizo, Gonzalo A.
In: Frontiers in Plant Science, Jg. 12
ExoS/ChvI Two-Component Signal-Transduction System Activated in the Absence of Bacterial Phosphatidylcholine
Geiger, Otto ; Sohlenkamp, Christian ; Vera-Cruz, Diana ; Medeot, Daniela B ; Martinez-Aguilar, Lourdes ; Sahonero-Canavesi, Diana X ; Weidner, Stefan ; Pühler, Alfred ; Lopez-Lara, Isabel M
In: Frontiers in Plant Science, Jg. 12
Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14
Wibberg, Daniel ; Genzel, Franziska ; Verwaaijen, Bart ; Blom, Jochen ; Rupp, Oliver ; Goesmann, Alexander ; Zrenner, Rita ; Grosch, Rita ; Pühler, Alfred ; Schlüter, Andreas
In: Journal of Fungi, Jg. 7 H. 10
Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants
Hassa, Julia ; Klang, Johanna ; Benndorf, Dirk ; Pohl, Marcel ; Hülsemann, Benedikt ; Mächtig, Torsten ; Effenberger, Mathias ; Pühler, Alfred ; Schlüter, Andreas ; Theuerl, Susanne
In: Microorganisms, Jg. 9 H. 7
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
Droste, Julian ; Ortseifen, Vera ; Schaffert, Lena ; Persicke, Marcus ; Schneiker-Bekel, Susanne ; Pühler, Alfred ; Kalinowski, Jörn
In: BMC genomics, Jg. 21
Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter
Hassa, Julia ; Wibberg, Daniel ; Maus, Irena ; Pühler, Alfred ; Schlüter, Andreas
In: Microorganisms, Jg. 8 H. 1
Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics
Maus, Irena ; Klocke, Michael ; Derenkó, Jaqueline ; Stolze, Yvonne ; Beckstette, Michael ; Jost, Carsten ; Wibberg, Daniel ; Blom, Jochen ; Henke, Christian ; Willenbücher, Katharina ; Rumming, Madis ; Rademacher, Antje ; Pühler, Alfred ; Sczyrba, Alexander ; Schlüter, Andreas
In: Environmental Microbiome, Jg. 15 H. 1
A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110
Droste, Julian ; Kulisch, Martin ; Wolf, Timo ; Schaffert, Lena ; Schneiker-Bekel, Susanne ; Pühler, Alfred ; Kalinowski, Jörn
In: Applied microbiology and biotechnology, Jg. 104, S. 9283–9294 ff.
pSETT4, an Improved φC31-Based Integrative Vector System for Actinoplanes sp. SE50/110
Schaffert, Lena ; Jacob, Lucas ; Schneiker-Bekel, Susanne ; Persicke, Marcus ; März, Camilla ; Rückert, Christian ; Pühler, Alfred ; Kalinowski, Jörn
In: Microbiology Resource Announcements, Jg. 9 H. 39
Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry
López, J. L. ; Lozano, M. J. ; Lagares, A. ; Fabre, M. L. ; Draghi, W. O. ; Del Papa, M. F. ; Pistorio, M. ; Becker, A. ; Wibberg, Daniel ; Schlüter, Andreas ; Pühler, Alfred ; Blom, J. ; Goesmann, A. ; Lagares, A.
In: mBio, Jg. 10 H. 3
de.NBI Cloud federation through ELIXIR AAI
Belmann, Peter ; Fischer, Björn ; Krüger, Jan ; Procházka, Michal ; Rasche, Helena ; Prinz, Manuel ; Hanussek, Maximilian ; Lang, Martin ; Bartusch, Felix ; Gläßle, Benjamin ; Krüger, Jens ; Pühler, Alfred ; Sczyrba, Alexander
In: F1000Research, Jg. 8
Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes
Nelkner, Johanna ; Henke, Christian ; Lin, Timo Wentong ; Pätzold, Wiebke ; Hassa, Julia ; Jaenicke, Sebastian ; Grosch, Rita ; Pühler, Alfred ; Sczyrba, Alexander ; Schlüter, Andreas
In: Genes, Jg. 10 H. 6
Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110
Schaffert, Lena ; März, Camilla ; Burkhardt, Lisa ; Droste, Julian ; Brandt, David ; Busche, Tobias ; Rosen, Winfried ; Schneiker-Bekel, Susanne ; Persicke, Marcus ; Pühler, Alfred ; Kalinowski, Jörn
In: Microbial Cell Factories, Jg. 18 H. 1
Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics
Nelkner, Johanna ; Tejerizo, Gonzalo Torres ; Hassa, Julia ; Lin, Timo Wentong ; Witte, Julian ; Verwaaijen, Bart ; Winkler, Anika ; Bunk, Boyke ; Spröer, Cathrin ; Overmann, Jörg ; Grosch, Rita ; Pühler, Alfred ; Schlüter, Andreas
In: Genes, Jg. 10 H. 8
Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis
Maus, Irena ; Kim, Yong Sung ; Wibberg, Daniel ; Stolze, Yvonne ; Off, Sandra ; Antonczyk, Sebastian ; Pühler, Alfred ; Scherer, Paul ; Schlüter, Andreas
In: Journal of Microbiology and Biotechnology, Jg. 27 H. 2, S. 321-334
Engineering and characterization of Xanthomonas campestris pv. campestris towards an enhanced production of the exopolysaccharide xanthan
Steffens, Tim
2017
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T
Torres Tejerizo, Gonzalo Arturo ; Wibberg, Daniel ; Winkler, Anika ; Ormeño-Orrillo, Ernesto ; Martínez-Romero, Esperanza ; Niehaus, Karsten ; Pühler, Alfred ; Kalinowski, Jörn ; Lagares, Antonio ; Schlüter, Andreas ; Pistorio, Mariano
In: Genome Announcements, Jg. 5 H. 4, S. e01513-16
The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf, Timo ; Droste, Julian ; Gren, Tetiana ; Ortseifen, Vera ; Schneiker-Bekel, Susanne ; Zemke, Till ; Pühler, Alfred ; Kalinowski, Jörn
In: BMC Genomics, Jg. 18 H. 1
The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)
Verwaaijen, Bart ; Wibberg, Daniel ; Kröber, Magdalena ; Winkler, Anika ; Zrenner, Rita ; Bednarz, Hanna ; Niehaus, Karsten ; Grosch, Rita ; Pühler, Alfred ; Schlüter, Andreas
In: PLOS ONE, Jg. 12 H. 5
Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
Koeck, Daniela E. ; Maus, Irena ; Wibberg, Daniel ; Winkler, Anika ; Zverlov, Vladimir V. ; Liebl, Wolfgang ; Pühler, Alfred ; Schwarz, Wolfgang H. ; Schlüter, Andreas
In: Genome Announcements, Jg. 4 H. 4, S. e00687-16
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Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa

ExoS/ChvI Two-Component Signal-Transduction System Activated in the Absence of Bacterial Phosphatidylcholine

Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14

Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants

The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.

Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter

Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics

A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110

pSETT4, an Improved φC31-Based Integrative Vector System for Actinoplanes sp. SE50/110

Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry

de.NBI Cloud federation through ELIXIR AAI

Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes

Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110

Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics

Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis

Engineering and characterization of Xanthomonas campestris pv. campestris towards an enhanced production of the exopolysaccharide xanthan

Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T

The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110

The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)

Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor