- on 03/03/2022
Current Trends and Future Directions of Large Scale Image and Video Annotation: Observations From Four Years of BIIGLE 2.0
Zurowietz, Martin ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Vol. 8
- on 14/07/2021
WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages
Kölling, Jan ; Langenkämper, Daniel ; Sylvie, Abouna ; Michale, Khan ; Nattkemper, Tim WilhelmIn: Bioinformatics, Vol. 28 Issue 8, page 1143-1150ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments
Hattab, Georges ; Schlüter, Jan-Philip ; Becker, Anke ; Nattkemper, Tim WilhelmIn: Frontiers in Genetics, Vol. 8Unsupervised Knowledge Transfer for Object Detection in Marine Environmental Monitoring and Exploration
Zurowietz, Martin ; Nattkemper, Tim WilhelmIn: IEEE Access, Vol. 8TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach
Diaz, Naryttza N. ; Krause, Lutz ; Goesmann, Alexander ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Vol. 10 Issue 1, page 56 et seq.Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging
Gorzolka, Karin ; Kölling, Jan ; Nattkemper, Tim Wilhelm ; Niehaus, KarstenIn: PLOS ONE, Vol. 11 Issue 3Semi-automated image analysis for the assessment of megafaunal densities at the Arctic deep-sea observatory HAUSGARTEN
Schoening, Timm ; Bergmann, Melanie ; Purser, Autun ; Dannheim, Jennifer ; Gutt, Julian ; Nattkemper, Tim WilhelmIn: PLoS ONE, Vol. 7 Issue 6RecoMIA - Recommendations for marine image annotation: Lessons learned and future directions
Schoening, Timm ; Osterloff, Jonas ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Vol. 3RAMTaB: Robust Alignment of Multi-Tag Bioimages
Raza, Shan-E-Ahmed ; Epstein, David ; Nattkemper, Tim Wilhelm ; Rajpoot, NasirIn: PLoS ONE, Vol. 7 Issue 2Phylogenetic classification of short environmental DNA fragments
Krause, Lutz ; Diaz, Naryttza N. ; Goesmann, Alexander ; Kelley, Scott ; Nattkemper, Tim Wilhelm ; Rohwer, Forest ; Edwards, Robert A. ; Stoye, JensIn: Nucleic Acids Research, Vol. 36 Issue 7, page 2230-2239Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics
Timm, Wiebke ; Scherbart, Alexandra ; Boecker, Sebastian ; Kohlbacher, Oliver ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Vol. 9 Issue 1, page 443 et seq.On the impact of Citizen Science-derived data quality on deep learning based classification in marine images
Langenkämper, Daniel ; Simon-Lledó, Erik ; Hosking, Brett ; Jones, Daniel O. B. ; Nattkemper, Tim WilhelmIn: PLOS ONE, Vol. 14 Issue 6MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration
Zurowietz, Martin ; Langenkämper, Daniel ; Hosking, Brett ; Ruhl, Henry ; Nattkemper, Tim WilhelmIn: PLoS ONE, Vol. 13 Issue 11Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform
Kessler, Nikolas ; Bonte, Anja ; Albaum, Stefan ; Mäder, Paul ; Messmer, Monika ; Goesmann, Alexander ; Niehaus, Karsten ; Langenkämper, Georg ; Nattkemper, Tim WilhelmIn: Frontiers in Bioinformatics and Computational Biology, Vol. 3Image fusion for dynamic contrast enhanced magnetic resonance imaging
Twellmann, Thorsten ; Saalbach, Axel ; Gerstung, Olaf ; Leach, Martin O ; Nattkemper, Tim WilhelmIn: Biomed Eng Online, Vol. 3 Issue 1
- on 13/07/2021
GISMO - gene identification using a support vector machine for ORF classification
Krause, Lutz ; McHardy, Alice C. ; Nattkemper, Tim Wilhelm ; Pühler, Alfred ; Stoye, Jens ; Meyer, FolkerIn: Nucleic Acids Research, Vol. 35 Issue 2, page 540-549Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification
Langenkämper, Daniel ; van Kevelaer, Robin ; Purser, Autun ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Vol. 7Fast Visual Exploration of Mass Spectrometry Images with Interactive Dynamic Spectral Similarity Pseudocoloring
Wüllems, Karsten ; Zurowietz, Annika ; Zurowietz, Martin ; Schneider, Roland ; Bednarz, Hanna ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: Scientific Reports, Vol. 11Detection and visualization of communities in mass spectrometry imaging data.
Wüllems, Karsten ; Kölling, Jan ; Bednarz, Hanna ; Niehaus, Karsten ; Hans, Volkmar H. ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Vol. 20 Issue 1DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections
Schoening, Timm ; Kuhn, Thomas ; Bergmann, Melanie ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Vol. 2