Affix Trees
2000
Algorithmic complexity of protein identification: combinatorics of weighted strings
In: Discrete Applied Mathematics, Jg. 137 H. 1, S. 27-462004

An iterative method for faster sum-of-pairs multiple sequence alignment
In: Bioinformatics, Jg. 16 H. 9, S. 808-8142000
Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants
In: BMC Genomics, Jg. 21 H. Suppl. 22020

Approximating the DCJ distance of balanced genomes in linear time
In: Algorithms for Molecular Biology, Jg. 12 H. 12017

BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison
In: Bioinformatics, Jg. 21 H. 7, S. 853-8592005
Benchmarking tools for the alignment of functional noncoding DNA
In: BMC Bioinformatics, Jg. 5 H. 12004




Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage
In: Algorithms for Molecular Biology, Jg. 11 H. 12016

Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets
In: BMC Bioinformatics, Jg. 13 H. 12012
Common intervals and sorting by reversals: a marriage of necessity
In: Bioinformatics, Jg. 18 H. Suppl 2, S. S54-S632002

Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms
In: NUCLEIC ACIDS RESEARCH, Jg. 36 H. Web Server, S. W433-W4372008