

A comprehensive comparison of comparative RNA structure prediction approaches
In: BMC Bioinformatics, Jg. 5 H. 12004
Correction: Versatile and declarative dynamic programming using pair algebras
In: BMC Bioinformatics, Jg. 7 H. 12006
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
In: BMC Bioinformatics, Jg. 5 H. 12004
e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences
In: NUCLEIC ACIDS RESEARCH, Jg. 32 H. Web Server, S. W301-W3042004


Efficient implementation of lazy suffix trees
In: SOFTWARE-PRACTICE & EXPERIENCE, Jg. 33 H. 11, S. 1035-10492003
Fast index based algorithms and software for matching position specific scoring matrices
In: BMC Bioinformatics, Jg. 7 H. 12006

GenDB - an open source genome annotation system for prokaryote genomes
In: Nucleic Acids Research, Jg. 31 H. 8, S. 2187-21952003
GeneFisher-P: variations of GeneFisher as processes in Bio-jETI
In: BMC Bioinformatics, Jg. 9 H. Suppl 42008
A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti
In: BMC Genomics, Jg. 11 H. 12010
KnotInFrame: prediction of –1 ribosomal frameshift events
In: Nucleic Acids Research, Jg. 36 H. 18, S. 6013-60202008
pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows
In: NUCLEIC ACIDS RESEARCH, Jg. 35 H. Web Server, S. W320-W3242007
REPuter: the manifold applications of repeat analysis on a genomic scale
In: Nucleic Acids Research, Jg. 29 H. 22, S. 4633-46422001
Shape based indexing for faster search of RNA family databases
In: BMC Bioinformatics, Jg. 9 H. 1, S. 131 ff.2008
Versatile and declarative dynamic programming using pair algebras
In: BMC Bioinformatics, Jg. 6 H. 12005
WAMI: a web server for the analysis of minisatellite maps
In: BMC Evolutionary Biology, Jg. 10 H. 12010
