Metabolic survey of Botryococcus braunii: Impact of the physiological state on product formation
Blifernez-Klassen, Olga ; Chaudhari, Swapnil ; Klassen, Viktor ; Wördenweber, Robin ; Steffens, Tim ; Cholewa, Dominik ; Niehaus, Karsten ; Kalinowski, Jörn ; Kruse, OlafIn: PLOS ONE, Jg. 13 H. 62018Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia
Blifernez-Klassen, Olga ; Klassen, Viktor ; Wibberg, Daniel ; Cebeci, Enis ; Henke, Christian ; Rückert, Christian ; Chaudhari, Swapnil ; Rupp, Oliver ; Blom, Jochen ; Winkler, Anika ; Al-Dilaimi, Arwa ; Goesmann, Alexander ; Sczyrba, Alexander ; Kalinowski, Jörn ; Bräutigam, Andrea ; Kruse, OlafIn: Scientific Reports, Jg. 11 H. 12021Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines
Brandt, David ; Simunovic, Marina ; Busche, Tobias ; Haak, Markus ; Belmann, Peter ; Jünemann, Sebastian ; Schulz, Tizian ; Klages, Levin Joe ; Vinke, Svenja ; Beckstette, Michael ; Pohl, Ehmke ; Scherer, Christiane ; Sczyrba, Alexander ; Kalinowski, JörnIn: Viruses, Jg. 13 H. 92021Application of Next Generation Sequencing (NGS) in Phage Displayed Peptide Selection to Support the Identification of Arsenic-Binding Motifs
Braun, Robert ; Schönberger, Nora ; Vinke, Svenja ; Lederer, Franziska ; Kalinowski, Jörn ; Pollmann, KatrinIn: Viruses, Jg. 12 H. 122020Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type [...]
Busche, Tobias ; Novakova, Renata ; Al'Dilaimi, Arwa ; Homerova, Dagmar ; Feckova, Lubomira ; Rezuchova, Bronislava ; Mingyar, Erik ; Csolleiova, Dominika ; Bekeova, Carmen ; Winkler, Anika ; Sevcikova, Beatrica ; Kalinowski, Jörn ; Kormanec, Jan ; Rückert, ChristianIn: Genome Announcements, Jg. 6 H. 92018Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory [...]
Busche, Tobias ; Silar, Radoslav ; Picmanova, Martina ; Patek, Miroslav ; Kalinowski, JörnIn: BMC Genomics, Jg. 13 H. 12012A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110
Droste, Julian ; Kulisch, Martin ; Wolf, Timo ; Schaffert, Lena ; Schneiker-Bekel, Susanne ; Pühler, Alfred ; Kalinowski, JörnIn: Applied microbiology and biotechnology, Jg. 104, S. 9283–9294 ff.2020The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
Droste, Julian ; Ortseifen, Vera ; Schaffert, Lena ; Persicke, Marcus ; Schneiker-Bekel, Susanne ; Pühler, Alfred ; Kalinowski, JörnIn: BMC genomics, Jg. 212020Extensive Reannotation of the Genome of the Model Streptomycete Streptomyces lividans TK24 Based on Transcriptome and Proteome Information
Droste, Julian ; Rückert, Christian ; Kalinowski, Jörn ; Hamed, Mohamed Belal ; Anné, Jozef ; Simoens, Kenneth ; Bernaerts, Kristel ; Economou, Anastassios ; Busche, TobiasIn: Frontiers in Microbiology, Jg. 122021Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches
Engel, Kathrin ; Pankoke, Helga ; Jünemann, Sebastian ; Brandl, Hanja B. ; Sauer, Jan ; Griffith, Simon ; Kalinowski, Jörn ; Caspers, BarbaraIn: BMC Ecology, Jg. 20 H. 12020Functional Redundancy and Specialization of the Conserved Cold Shock Proteins in Bacillus subtilis
Faßhauer, Patrick ; Busche, Tobias ; Kalinowski, Jörn ; Mäder, Ulrike ; Poehlein, Anja ; Daniel, Rolf ; Stülke, JörgIn: Microorganisms, Jg. 9 H. 72021Functional genomics of pH homeostasis in Corynebacterium glutamicum revealed novel links between pH response, oxidative stress, iron homeostasis and methionine [...]
Follmann, Martin ; Ochrombel, Ines ; Kraemer, Reinhard ; Troetschel, Christian ; Poetsch, Ansgar ; Rückert, Christian ; Hueser, Andrea ; Persicke, Marcus ; Seiferling, Dominic ; Kalinowski, Jörn ; Marin, KayIn: BMC Genomics, Jg. 10 H. 1, S. 621 ff.2009A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production
Friehs, Karl ; Schwarzhans, Jan Philipp ; Luttermann, Tobias ; Wibberg, Daniel ; Winkler, Anika ; Hübner, Wolfgang ; Huser, Thomas ; Kalinowski, JörnIn: Frontiers in Microbiology, Jg. 82017The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in [...]
Gaigalat, Lars ; Schlüter, Jan-Philip ; Hartmann, Michelle ; Mormann, Sascha ; Tauch, Andreas ; Pühler, Alfred ; Kalinowski, JörnIn: BMC Molecular Biology, Jg. 8 H. 12007Streptomyces spp. From the Marine Sponge Antho dichotoma: Analyses of Secondary Metabolite Biosynthesis Gene Clusters and Some of Their Products
Guerrero-Garzón, Jaime Felipe ; Zehl, Martin ; Schneider, Olha ; Rückert, Christian ; Busche, Tobias ; Kalinowski, Jörn ; Bredholt, Harald ; Zotchev, Sergey B.In: Frontiers in Microbiology, Jg. 112020Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion
Hemmerich, Johannes ; Labib, Mohamed ; Steffens, Carmen ; Reich, Sebastian J. ; Weiske, Marc ; Baumgart, Meike ; Rückert, Christian ; Ruwe, Matthias ; Siebert, Daniel ; Wendisch, Volker F. ; Kalinowski, Jörn ; Wiechert, Wolfgang ; Oldiges, MarcoIn: Microbial Biotechnology, Jg. 13 H. 6, S. 2020-20312020Expanding The Genetic Code
Karsten, Lennard ; Bergen, Daniel ; Drake, Christina ; Dymek, Saskia ; Edich, Maximilian ; Haak, Markus ; Kerkhoff, Denise ; Kerkhoff, Yannic ; Liebers, Michelle ; März, Camilla ; Schlüter, Laura ; Schmidt, Olga ; Vinke, Svenja ; M. Whitford, Christopher ; Pucker, Boas ; Droste, Julian ; Rückert, Christian ; Müller, Kristian ; Kalinowski, Jörn2017Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation
Kreienbaum, Maximilian ; Dörrich, Anja K. ; Brandt, David ; Schmid, Nicole E. ; Leonhard, Tabea ; Hager, Fabian ; Brenzinger, Susanne ; Hahn, Julia ; Glatter, Timo ; Ruwe, Matthias ; Briegel, Ariane ; Kalinowski, Jörn ; Thormann, Kai M.In: Frontiers in Microbiology, Jg. 112020Microparticles globally reprogram Streptomyces albus toward accelerated morphogenesis, streamlined carbon core metabolism and enhanced production of the [...]
Kuhl, Martin ; Gläser, Lars ; Rebets, Yuriy ; Rückert, Christian ; Sarkar, Namrata ; Hartsch, Thomas ; Kalinowski, Jörn ; Luzhetskyy, Andriy ; Wittmann, Christoph2020Establishment of a near-contiguous genome sequence of the citric acid producing yeast DSM 3286 with resolution of rDNA clusters and telomeres
Luttermann, Tobias ; Rückert, Christian ; Wibberg, Daniel ; Busche, Tobias ; Schwarzhans, Jan-Philipp ; Friehs, Karl ; Kalinowski, JörnIn: NAR Genomics and Bioinformatics, Jg. 3 H. 4, S. 13 ff.2021