BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison
Bartels, Daniela ; Kespohl, Sebastian ; Albaum, Stefan ; Drüke, Tanja ; Goesmann, Alexander ; Herold, Julia ; Kaiser, Olaf ; Pühler, Alfred ; Pfeiffer, Friedhelm ; Raddatz, Günter ; Stoye, Jens ; Meyer, Folker ; Schuster, Stephan C.In: Bioinformatics, Jg. 21 H. 7, S. 853-8592005EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data
Dondrup, Michael ; Albaum, Stefan ; Griebel, Thasso ; Henckel, Kolja ; Jünemann, Sebastian ; Kahlke, Tim ; Kleindt, Christiane Katja ; Kuester, Helge ; Linke, Burkhard ; Mertens, Dominik ; Mittard-Runte, Virginie ; Neuweger, Heiko ; Runte, Kai J. ; Tauch, Andreas ; Tille, Felix ; Pühler, Alfred ; Goesmann, AlexanderIn: BMC Bioinformatics, Jg. 10 H. 12009The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Borde [...]
Gross, Roy ; Guzman, Carlos A. ; Sebaihia, Mohammed ; Martins dos Santos, Vítor A. P. ; Pieper, Dietmar H. ; Koebnik, Ralf ; Lechner, Melanie ; Bartels, Daniela ; Buhrmester, Jens ; Choudhuri, Jomuna V. ; Ebensen, Thomas ; Gaigalat, Lars ; Herrmann, Stefanie ; Khachane, Amit N. ; Larisch, Christof ; Link, Stefanie ; Linke, Burkhard ; Meyer, Folker ; Mormann, Sascha ; Nakunst, Diana [...]In: BMC Genomics, Jg. 9 H. 12008GenDB - an open source genome annotation system for prokaryote genomes
Meyer, Folker ; Goesmann, Alexander ; McHardy, Alice C. ; Bartels, Daniela ; Bekel, Thomas ; Clausen, Jörn ; Kalinowski, Jörn ; Linke, Burkhard ; Rupp, Oliver ; Giegerich, Robert ; Pühler, AlfredIn: Nucleic Acids Research, Jg. 31 H. 8, S. 2187-21952003CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data
Neuweger, Heiko ; Baumbach, Jan ; Albaum, Stefan ; Bekel, Thomas ; Dondrup, Michael ; Hüser, Andrea T. ; Kalinowski, Jörn ; Oehm, Sebastian ; Pühler, Alfred ; Rahmann, Sven ; Weile, Jochen ; Goesmann, AlexanderIn: BMC Systems Biology, Jg. 1 H. 12007Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14
Wibberg, Daniel ; Genzel, Franziska ; Verwaaijen, Bart ; Blom, Jochen ; Rupp, Oliver ; Goesmann, Alexander ; Zrenner, Rita ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Journal of Fungi, Jg. 7 H. 102021Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 [...]
Wibberg, Daniel ; Rupp, Oliver ; Blom, Jochen ; Jelonek, Lukas ; Kröber, Magdalena ; Verwaaijen, Bart ; Goesmann, Alexander ; Albaum, Stefan ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Plos One, Jg. 10 H. 122015Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38
Wibberg, Daniel ; Tielen, Petra ; Blom, Jochen ; Rosin, Nathalie ; Schobert, Max ; Tüpker, Reinhilde ; Schatschneider, Sarah ; Spilker, Dominik ; Albersmeier, Andreas ; Goesmann, Alexander ; Vorhölter, Frank-Jörg ; Pühler, Alfred ; Jahn, DieterIn: Genome announcements, Jg. 2 H. 22014