A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study
Albaum, Stefan ; Hahne, H. ; Otto, A. ; Haußmann, U. ; Becher, D. ; Poetsch, A. ; Goesmann, Alexander ; Nattkemper, Tim WilhelmIn: Proteome Science, Jg. 9 H. 12011TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach
Diaz, Naryttza N. ; Krause, Lutz ; Goesmann, Alexander ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Jg. 10 H. 1, S. 56 ff.2009Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging
Gorzolka, Karin ; Kölling, Jan ; Nattkemper, Tim Wilhelm ; Niehaus, KarstenIn: PLOS ONE, Jg. 11 H. 32016ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments
Hattab, Georges ; Schlüter, Jan-Philip ; Becker, Anke ; Nattkemper, Tim WilhelmIn: Frontiers in Genetics, Jg. 82017A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy
Hattab, Georges ; Wiesmann, Veit ; Becker, Anke ; Munzner, Tamara ; Nattkemper, Tim WilhelmIn: Frontiers in Bioengineering and Biotechnology, Jg. 62018Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform
Kessler, Nikolas ; Bonte, Anja ; Albaum, Stefan ; Mäder, Paul ; Messmer, Monika ; Goesmann, Alexander ; Niehaus, Karsten ; Langenkämper, Georg ; Nattkemper, Tim WilhelmIn: Frontiers in Bioinformatics and Computational Biology, Jg. 32015ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis
Kessler, Nikolas ; Walter, Frederik ; Persicke, Marcus ; Albaum, Stefan ; Kalinowski, Jörn ; Goesmann, Alexander ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: PLoS ONE, Jg. 9 H. 112014Phylogenetic classification of short environmental DNA fragments
Krause, Lutz ; Diaz, Naryttza N. ; Goesmann, Alexander ; Kelley, Scott ; Nattkemper, Tim Wilhelm ; Rohwer, Forest ; Edwards, Robert A. ; Stoye, JensIn: Nucleic Acids Research, Jg. 36 H. 7, S. 2230-22392008GISMO - gene identification using a support vector machine for ORF classification
Krause, Lutz ; McHardy, Alice C. ; Nattkemper, Tim Wilhelm ; Pühler, Alfred ; Stoye, Jens ; Meyer, FolkerIn: Nucleic Acids Research, Jg. 35 H. 2, S. 540-5492007WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages
Kölling, Jan ; Langenkämper, Daniel ; Sylvie, Abouna ; Michale, Khan ; Nattkemper, Tim WilhelmIn: Bioinformatics, Jg. 28 H. 8, S. 1143-11502012AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization
Langenkämper, Daniel ; Goesmann, Alexander ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Jg. 15 H. 12014On the impact of Citizen Science-derived data quality on deep learning based classification in marine images
Langenkämper, Daniel ; Simon-Lledó, Erik ; Hosking, Brett ; Jones, Daniel O. B. ; Nattkemper, Tim WilhelmIn: PLOS ONE, Jg. 14 H. 62019BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections
Langenkämper, Daniel ; Zurowietz, Martin ; Schoening, Timm ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Jg. 4 H. March2017Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification
Langenkämper, Daniel ; van Kevelaer, Robin ; Purser, Autun ; Nattkemper, Tim WilhelmIn: Frontiers in Marine Science, Jg. 72020BIOIMAX - A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
Loyek, Christian ; Khan, Michael ; Rajpoot, Nasir ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Jg. 12 H. 12011A Normalized Tree Index for identification of correlated clinical parameters in microarray data
Martin, Christian ; Tauchen, Annika ; Becker, Anke ; Nattkemper, Tim WilhelmIn: BioData Mining, Jg. 4 H. 12011ALMI - A Generic Active Learning System for Computational Object Classification in Marine Observation Images
Möller, Torben ; Nattkemper, Tim WilhelmIn: Sensors, Jg. 21 H. 42021Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation
Osterloff, Jonas ; Nilssen, Ingunn ; Eide, Ingvar ; de Oliveira Figueiredo, Marcia Abreu ; de Souza Tâmega, Frederico Tapajós ; Nattkemper, Tim WilhelmIn: PLOS ONE, Jg. 11 H. 62016Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory.
Osterloff, Jonas ; Nilssen, Ingunn ; Jarnegren, Johanna ; Van Engeland, Tom ; Buhl-Mortensen, Pal ; Nattkemper, Tim WilhelmIn: Scientific reports, Jg. 9 H. 12019RAMTaB: Robust Alignment of Multi-Tag Bioimages
Raza, Shan-E-Ahmed ; Epstein, David ; Nattkemper, Tim Wilhelm ; Rajpoot, NasirIn: PLoS ONE, Jg. 7 H. 22012