Niewerth, Heiko; Schuldes, Jörg; Parschat, Katja; Kiefer, Patrick Matthias; Vorholt, Julia Anne; Daniel, Rolf; Fetzner, Susanne: Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a
Inhalt
- Results and discussion
- General genome features and comparative genomics
- Osmoprotection systems
- Endogenous generation of reactive oxygen species and protection against oxidative stress
- Acquisition of iron
- Response to heavy metal ions
- Response to antibiotics
- Biodegradative capabilities
- Conclusions
- Methods
- Bacterial strain
- Genome sequencing, assembly and gap closure
- Gene prediction and annotation and comparative genomics
- Pulsed field gel electrophoresis (PFGE)
- Metal susceptibility tests
- Antibiotic susceptibility assays
- Substrate utilization assays
- Expression of genes coding for anthranilate-CoA ligases, and activity assay
- LC-MS analysis of CoA thioesters in cell extracts of Arthrobacter sp. Rue61a
- Nucleotide sequence accession number
- Additional files
- Competing interests
- Authors’ contributions
- Acknowledgements
- Author details
- References