Schäfers, Sonja: Annexin A2 in membrane microdomain organisation and influenza A infection. 2010
Inhalt
- 1 Abstract
- 2 Introduction
- 2.1 The influenza A virus
- 2.1.1 Pathogen-host interactions
- 2.1.2 General properties of the influenza A virus
- 2.1.3 The influenza A replication cycle
- 2.1.4 Influenza A and apoptosis
- 2.2 Annexin A2
- 2.3 Aim of this thesis
- 3 Materials and Methods
- 3.1 Materials
- 3.1.1 Virus strains
- 3.1.2 Bacterial strains
- 3.1.3 Eukaryotic cell lines
- 3.1.4 Plasmids
- 3.1.5 Oligonucleotides
- 3.1.6 Enzymes
- 3.1.7 Antibodies
- 3.1.8 Kits
- 3.1.9 Chemicals and reagents
- 3.1.10 Other materials and equipment
- 3.2 Cellbiological methods
- 3.2.1 Cell culture
- 3.2.2 Freezing cells
- 3.2.3 Thawing cells
- 3.2.4 Transient transfection of eukaryotic cells
- 3.2.5 Immunofluorescence
- 3.2.6 Induction and microscopy of PMSs
- 3.2.8 Flow cytometry
- 3.3 Proteinbiochemical methods
- 3.3.1 Preparation of cellular protein extracts
- 3.3.2 Triton solubilisation
- 3.3.3 DRM flotation gradient
- 3.3.4 Protein quantification
- 3.3.5 Protein precipitation with TCA
- 3.3.6 SDS-PAGE
- 3.3.7 Western blotting
- 3.3.8 Stripping of blot membranes
- 3.4 Molecular biological methods
- 3.4.1 Bacterial methods
- 3.4.1.1 Cultivation and long term storage of bacteria
- 3.4.1.2 Preparation of CaCl2-competent E. coli DH5
- 3.4.1.3 Transformation of CaCl2 competent E. coli DH5
- 3.4.2 Methods of DNA preparation
- 3.4.2.1 Isolation and determination of plasmid DNA
- 3.4.2.2 Agarose gel electrophoresis
- 3.4.2.3 Elution of DNA from agarose gels
- 3.4.3 Enzymatic DNA methods
- 3.4.3.1 Restriction digests
- 3.4.3.2 Ligation of DNA fragments
- 3.4.3.3 PCR
- 3.4.3.4 Colony PCR
- 3.4.3.5 Sequencing of DNA
- 3.4.3.6 Real-time PCR
- 3.4.4 Cloning of mCherry labelled annexin A2 constructs
- 3.5 Virological methods
- 4 Results
- 4.1 Role of annexin A2 in IAV infection
- 4.1.1 Annexin A2 dependency of IAV replication
- 4.1.1.1 IAV replication in XM expressing cells
- 4.1.1.2 IAV replication in annexin A2 siRNA transfected cells
- 4.1.1.3 IAV replication in CMECs from an annexin A2 knockout mouse
- 4.1.2 Real-time PCR analysis of annexin A1 and annexin A2 after IAV infection
- 4.1.3 Hemagglutinin localisation in annexin A2 depleted cells
- 4.1.4 Annexin A2 and FPV localisation in infected cells
- 4.1.5 Annexin A2 incorporation in IAV particles
- 4.2 Involvement of annexin A2 in apoptotic processes
- 4.3 Association of annexin A2 with membrane microdomains
- 4.3.1 Cell fractionation by DRM flotation gradient
- 4.3.2 Influence of Tyr23 phosphorylation and PI(4,5)P2-binding on the association of annexin A2 with membrane microdomains
- 4.3.3 Influence of p11- and Ca2+- binding on the association of annexin A2 with membrane microdomains
- 4.3.4 Laurdan 2photon microscopy of annexin A2 expressing cells
- 5 Discussion
- 5.1 Annexin A2 in IAV infection
- 5.2 Annexin A2 in apoptotic processes
- 5.3 Annexin A2 association with membrane microdomains
- 6 References
- 7 Appendix
- Conference Presentations
- Curriculum Vitae
- Acknowledgements
