Tomazetto, Geizecler; Hahnke, Sarah; Wibberg, Daniel; Pühler, Alfred; Klocke, Michael; Schlüter, Andreas: Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as [...]. In: Biotechnology Reports. Jg.18. 2018
Inhalt
- 2.1 Strain cultivation and DNA isolation
- 2.2 Sequencing, assembly and annotation
- 2.3 Reconstruction of metabolic pathways
- 2.4 Nucleotide sequence accession number
- 3 Results and discussion
- 3.1 General features of the Proteiniphilum saccharofermentans str. M3/6T genome
- 3.2 Genes involved in complex carbohydrate or protein degradation
- 3.2.1 Pectin
- 3.2.2 Arabinogalactan
- 3.2.3 Hemicellulose
- 3.2.4 Cellulose
- 3.2.5 Chitin
- 3.2.6 Starch
- 3.2.7 Pullulan
- 3.2.8 Fructan
- 3.3 Polysaccharide utilization loci (PUL)
- 3.4 Putative fermentation metabolic pathways
- 3.5 P. saccharofermentans M3/6T harbors two CRISPR-cas systems
- 3.6 Comparative genomic analyses
- 4 Concluding remarks
- Competing interests
- Acknowledgements
- Appendix A Supplementary data
- References