Feijão, Pedro; Soares de Araujo, Francisco Eloi: Fast ancestral gene order reconstruction of genomes with unequal gene content. In: BMC Bioinformatics. Jg.17 H. S14. 2016
Inhalt
- Background
- Preliminaries
- Genes and genomes
- DCJ operation and the breakpoint graph
- DCJ distance for unequal content genomes
- Enumerating all optimal completions
- Methods
- Intermediate genomes
- Ancestral reconstruction
- Ancestral reconstruction algorithms
- Finding adjacency weights
- Estimating branch lengths
- An algorithm for the IG-Indel small parsimony problem
- Results
- Discussion
- Conclusion
- Acknowledgements
- Declarations
- Availability of data and materials
- Authors' contributions
- Competing interests
- Consent for publication
- Ethics approval and consent to participate
- Author details
- References