Neuweger, Heiko; Persicke, Marcus; Albaum, Stefan; Bekel, Thomas; Dondrup, Michael; Hüser, Andrea T.; Winnebald, Jörn; Schneider, Jessica; Kalinowski, Jörn; Goesmann, Alexander: Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum [...]. In: BMC Systems Biology. Jg.3 H. 1. 2009
Inhalt
- Conclusion
- Background
- Data Visualization
- Existing Systems and Pathway repositories
- Corynebacterium glutamicum and lysine production
- Implementation
- Results and Discussion
- Fermentation of the strain C. glutamicum DM1730 under different aeration conditions
- Visualization of single analysis experiments - transcriptome analysis
- Up regulation of the nar operon under oxygen-limiting conditions
- Down regulation of the atp operon after oxygen depletion
- Combined metabolite pools and transcript abundances
- Conclusion
- Availability and requirements
- Authors' contributions
- Additional material
- Acknowledgements
- References