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In: Journal of computer and system sciences, Jg. 69 H. 4, S. 525-5462004


A novel approach to remote homology detection: jumping alignments
In: Journal of Computational Biology, Jg. 9 H. 5, S. 747-7602002



Phylogenetic classification of short environmental DNA fragments
In: Nucleic Acids Research, Jg. 36 H. 7, S. 2230-22392008



QAlign: quality-based multiple alignments with dynamic phylogenetic analysis
In: BIOINFORMATICS, Jg. 19 H. 12, S. 1592-15932003
REPuter: the manifold applications of repeat analysis on a genomic scale
In: Nucleic Acids Research, Jg. 29 H. 22, S. 4633-46422001
Simple and flexible detection of contiguous repeats using a suffix tree
In: Theoretical Computer Science, Jg. 270 H. 1-2, S. 843-8562002



WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads
In: BMC Bioinformatics, Jg. 10 H. 1, S. 430 ff.2009
