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Blifernez-Klassen, Olga ; Klassen, Viktor ; Wibberg, Daniel ; Cebeci, Enis ; Henke, Christian ; Rückert, Christian ; Chaudhari, Swapnil ; Rupp, Oliver ; Blom, Jochen ; Winkler, Anika ; Al-Dilaimi, Arwa ; Goesmann, Alexander ; Sczyrba, Alexander ; Kalinowski, Jörn ; Bräutigam, Andrea ; Kruse, OlafIn: Scientific Reports, Jg. 11 H. 12021Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa)
Blifernez-Klassen, Olga ; Wibberg, Daniel ; Winkler, Anika ; Blom, Jochen ; Goesmann, Alexander ; Kalinowski, Jörn ; Kruse, OlafIn: Genome Announcements, Jg. 4 H. 32016Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel [...]
Bogen, Christian ; Al-Dilaimi, Arwa ; Albersmeier, Andreas ; Wichmann, Julian ; Grundmann, Michael ; Rupp, Oliver ; Lauersen, Kyle J. ; Blifernez-Klassen, Olga ; Kalinowski, Jörn ; Goesmann, Alexander ; Mussgnug, Jan H. ; Kruse, OlafIn: BMC Genomics, Jg. 14 H. 12013TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach
Diaz, Naryttza N. ; Krause, Lutz ; Goesmann, Alexander ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: BMC Bioinformatics, Jg. 10 H. 1, S. 56 ff.2009EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data
Dondrup, Michael ; Albaum, Stefan ; Griebel, Thasso ; Henckel, Kolja ; Jünemann, Sebastian ; Kahlke, Tim ; Kleindt, Christiane Katja ; Kuester, Helge ; Linke, Burkhard ; Mertens, Dominik ; Mittard-Runte, Virginie ; Neuweger, Heiko ; Runte, Kai J. ; Tauch, Andreas ; Tille, Felix ; Pühler, Alfred ; Goesmann, AlexanderIn: BMC Bioinformatics, Jg. 10 H. 12009Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8
Farnbacher, Max ; Jahns, Thomas ; Willrodt, Dirk ; Daniel, Rolf ; Haas, Rainer ; Goesmann, Alexander ; Kurtz, Stefan ; Rieder, GabrieleIn: BMC Genomics, Jg. 11 H. 12010BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser
Goesmann, Alexander ; Linke, Burkhard ; Bartels, Daniela ; Dondrup, Michael ; Krause, Lutz ; Neuweger, Heiko ; Oehm, Sebastian ; Paczian, Tobias ; Wilke, Andreas ; Meyer, FolkerIn: Nucleic Acids Research, Jg. 33 H. Web Server, S. W710-W7162005The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Borde [...]
Gross, Roy ; Guzman, Carlos A. ; Sebaihia, Mohammed ; Martins dos Santos, Vítor A. P. ; Pieper, Dietmar H. ; Koebnik, Ralf ; Lechner, Melanie ; Bartels, Daniela ; Buhrmester, Jens ; Choudhuri, Jomuna V. ; Ebensen, Thomas ; Gaigalat, Lars ; Herrmann, Stefanie ; Khachane, Amit N. ; Larisch, Christof ; Link, Stefanie ; Linke, Burkhard ; Meyer, Folker ; Mormann, Sascha ; Nakunst, Diana [...]In: BMC Genomics, Jg. 9 H. 12008MediPlEx - a tool to combine in silico and experimental gene expression profiles of the model legume Medicago truncatula.
Henckel, Kolja ; Küster, Helge ; Stutz, Leonhard ; Goesmann, AlexanderIn: BMC Research Notes, Jg. 3 H. 12010TRUNCATULIX - a data warehouse for the legume community
Henckel, Kolja ; Runte, Kai J. ; Bekel, Thomas ; Dondrup, Michael ; Jakobi, Tobias ; Küster, Helge ; Goesmann, AlexanderIn: BMC Plant Biology, Jg. 9 H. 1, S. 19 ff.2009Transcriptional snapshots provide insights into the molecular basis of arbuscular mycorrhiza in the model legume Medicago truncatula
Hohnjec, Natalija ; Henckel, Kolja ; Bekel, Thomas ; Gouzy, Jerome ; Dondrup, Michael ; Goesmann, Alexander ; Küster, HelgeIn: FUNCTIONAL PLANT BIOLOGY, Jg. 33 H. 8, S. 737-7482006Time-resolved transcriptome analysis and lipid pathway reconstruction of the oleaginous green microalga Monoraphidium neglectum reveal a model for triacylglycerol [...]
Jaeger, Daniel ; Winkler, Anika ; Mussgnug, Jan H. ; Kalinowski, Jörn ; Goesmann, Alexander ; Kruse, OlafIn: Biotechnology for Biofuels, Jg. 10 H. 12017Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)
Jaenicke, Sebastian ; Bunk, Boyke ; Wibberg, Daniel ; Spröer, Cathrin ; Hersemann, Lena ; Blom, Jochen ; Winkler, Anika ; Schatschneider, Sarah ; Albaum, Stefan ; Kölliker, Roland ; Goesmann, Alexander ; Pühler, Alfred ; Overmann, Jörg ; Vorhölter, Frank-JörgIn: Genome Announcements, Jg. 4 H. 62016Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform
Kessler, Nikolas ; Bonte, Anja ; Albaum, Stefan ; Mäder, Paul ; Messmer, Monika ; Goesmann, Alexander ; Niehaus, Karsten ; Langenkämper, Georg ; Nattkemper, Tim WilhelmIn: Frontiers in Bioinformatics and Computational Biology, Jg. 32015ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and [...]
Kessler, Nikolas ; Walter, Frederik ; Persicke, Marcus ; Albaum, Stefan ; Kalinowski, Jörn ; Goesmann, Alexander ; Niehaus, Karsten ; Nattkemper, Tim WilhelmIn: PLoS ONE, Jg. 9 H. 112014Phylogenetic classification of short environmental DNA fragments
Krause, Lutz ; Diaz, Naryttza N. ; Goesmann, Alexander ; Kelley, Scott ; Nattkemper, Tim Wilhelm ; Rohwer, Forest ; Edwards, Robert A. ; Stoye, JensIn: Nucleic Acids Research, Jg. 36 H. 7, S. 2230-22392008Trace2PS and FSA2PS: two software toolkits for converting trace and fsa files to PostScript format
Krawczyk, Justina ; Goesmann, Alexander ; Nolte, Ralf ; Werber, Martin ; Weisshaar, BerndIn: Source Code for Biology and Medicine, Jg. 4 H. 1, S. 4 ff.2009GenDB - an open source genome annotation system for prokaryote genomes
Meyer, Folker ; Goesmann, Alexander ; McHardy, Alice C. ; Bartels, Daniela ; Bekel, Thomas ; Clausen, Jörn ; Kalinowski, Jörn ; Linke, Burkhard ; Rupp, Oliver ; Giegerich, Robert ; Pühler, AlfredIn: Nucleic Acids Research, Jg. 31 H. 8, S. 2187-21952003